Output Chart and Table for Natural Products or Drugs using OTTER


The Output of OTTER include 2 ECharts HTML, 1 CSV Table, and 1 Data File for R Heatmap:

PPI Chart (interactive HTML file, you can open it in any web browser)
Heatmap ECharts (interactive HTML file, you can open it in any web browser)
Heatmap Data for R (plain-text TXT format, to generate Heatmap in R)
Score Table (CSV format, you can open it in Excel)

1. Output Chart and Table for Celastrol using OTTER with the keyword "reactive oxygen species"

RNA-Seq Output : RNA-Seq Output for cells treated with Celastrol

Input Symbol List : Differentially expressed genes from cells treated with Celastrol

Output PPI Chart : Protein-protein interaction Chart for Celastrol ( Top 50 )

Output Heatmap : Heatmap with Scores and Ranking for Celastrol ( Top 50 )

Output PPI Chart : Protein-protein interaction Chart for Celastrol ( Top 20 )

Output Heatmap : Heatmap with Scores and Ranking for Celastrol ( Top 20 )

2. Output Chart and Table for Doxorubicin using OTTER with the keyword "anticancer"

RNA-Seq Output : RNA-Seq Output for cells treated with Doxorubicin

Input Symbol List : Differentially expressed genes from cells treated with Doxorubicin

Output PPI Chart : Protein-protein interaction Chart for Doxorubicin ( Top 50 )

Output Heatmap : Heatmap with Scores and Ranking for Doxorubicin ( Top 50 )

Output PPI Chart : Protein-protein interaction Chart for Doxorubicin ( Top 30 )

Output Heatmap : Heatmap with Scores and Ranking for Doxorubicin ( Top 30 )

3. Output Chart and Table for Tamoxifen using OTTER with the keyword "breast"

RNA-Seq Output : RNA-Seq Output for cells treated with Tamoxifen

Input Symbol List : Differentially expressed genes from cells treated with Tamoxifen

Output PPI Chart : Protein-protein interaction Chart for Tamoxifen ( Top 50 )

Output Heatmap : Heatmap with Scores and Ranking for Tamoxifen ( Top 50 )

Output PPI Chart : Protein-protein interaction Chart for Tamoxifen ( Top 30 )

Output Heatmap : Heatmap with Scores and Ranking for Tamoxifen ( Top 30 )

Due to space limitations, other examples are not listed here.


Academic users can use Output Charts and Tables of OTTER in publication or presentation.

Correspondence : Dr. Hao Zhang, Chemical Biology Research Center

Shanghai Institute of Materia Medica, Chinese Academy of Sciences